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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Brad Bohrer | Tied for 25th | Brad Bohrer | 42nd | 43rd |
| First Basemen | Josh Noeth | 3rd | Josh Noeth | 2nd | 2nd |
| Second Basemen | Joe Clark | 14th | Joe Clark | 8th | 8th |
| Third Basemen | Nate O'Neill | 19th | Nate O'Neill | 33rd | 33rd |
| Shortstops | Dan Alexander | 16th | Dan Alexander | 1st | 8th |
| Left Fielders | Danny Mills | 22nd | Danny Mills | 13th | 14th |
| Center Fielders | Jorge Soto | 6th | Jorge Soto | 27th | 25th |
| Right Fielders | Brad Coyle | 17th | Brad Coyle | 38th | 37th |
| Starting Pitchers | Jamie Jacobs | 29th | Jamie Jacobs | 14th | 15th |
| Relievers | Jon Courey | Tied for 1st | Juan Zamora | 11th | 11th |
| Closers | Juan Zamora | Tied for 1st | Juan Zamora | 30th | 30th |
