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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Daniel Spear | 2nd | Fernando Rosas | Tied for 4th | 2nd |
| First Basemen | Julio Cruz | Tied for 12th | Ross Curtis | Tied for 17th | 16th |
| Second Basemen | Oscar Luna | 5th | Carlin Schauer | 4th | 5th |
| Third Basemen | Matt Boyles | 2nd | Kevin Preston | 2nd | 1st |
| Shortstops | José Valdéz | 15th | Gabriel Perdomo | Tied for 7th | 13th |
| Left Fielders | John Howard | 7th | Dave Glesener | 20th | 19th |
| Center Fielders | Yasuaki Koga | 14th | Billy Marshall | 2nd | 13th |
| Right Fielders | Pedro Lara | 13th | Kosuke Amano | Tied for 18th | 15th |
| Starting Pitchers | Wade Conroy | 4th | Wade Conroy | 12th | 3rd |
| Relievers | Kenny Goralski | 8th | Dave Gough | 10th | 4th |
| Closers | Justin Pinkston | 19th | Antonio Reyes | 20th | 20th |
